Package: eicm
Version: 1.0.3
Date: 2023-04-28
Title: Explicit Interaction Community Models
Authors@R: c(person(given="Miguel", family="Porto",
  email="mpbertolo@gmail.com", comment = c(ORCID="0000-0001-7640-0623"), role=c("aut", "cre")),
  person(given="Pedro", family="Beja", comment = c(ORCID="0000-0001-8164-0760"), role="aut"))
Maintainer: Miguel Porto <mpbertolo@gmail.com>
Depends: R (>= 3.5.0)
Imports: methods, parallel, GA (>= 3.1.1), snow, doSNOW, iterators,
        pso, ucminf, foreach, graphics, optimParallel
Suggests: igraph, knitr, rmarkdown
VignetteBuilder: knitr
Description: Model fitting and species biotic interaction network
        topology selection for explicit interaction community models.
        Explicit interaction community models are an extension of
        binomial linear models for joint modelling of species
        communities, that incorporate both the effects of species
        biotic interactions and the effects of missing covariates.
        Species interactions are modelled as direct effects of each
        species on each of the others, and are estimated alongside the
        effects of missing covariates, modelled as latent factors. The
        package includes a penalized maximum likelihood fitting
        function, and a genetic algorithm for selecting the most
        parsimonious species interaction network topology.
License: GPL (>= 2)
Encoding: UTF-8
URL: https://github.com/miguel-porto/eicm
BugReports: https://github.com/miguel-porto/eicm
LazyData: true
RoxygenNote: 7.2.3
Repository: https://miguel-porto.r-universe.dev
Date/Publication: 2023-05-08 11:44:59 UTC
RemoteUrl: https://github.com/miguel-porto/eicm
RemoteRef: HEAD
RemoteSha: f6955860cc9e962ae7e1632aa50adc07d33601b3
NeedsCompilation: yes
Packaged: 2026-07-15 07:06:24 UTC; root
Author: Miguel Porto [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-7640-0623>),
  Pedro Beja [aut] (ORCID: <https://orcid.org/0000-0001-8164-0760>)